中国化学快报(英文版)2024,Vol.35Issue(5) :351-354.DOI:10.1016/j.cclet.2023.109419

Direct detection of C9orf72 hexanucleotide repeat expansions by nanopore biosensor

Xinqiong Li Guocheng Rao Xi Peng Chan Yang Yanjing Zhang Yan Tian Xianghui Fu Jia Geng
中国化学快报(英文版)2024,Vol.35Issue(5) :351-354.DOI:10.1016/j.cclet.2023.109419

Direct detection of C9orf72 hexanucleotide repeat expansions by nanopore biosensor

Xinqiong Li 1Guocheng Rao 2Xi Peng 3Chan Yang 1Yanjing Zhang 1Yan Tian 4Xianghui Fu 4Jia Geng5
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作者信息

  • 1. State Key Laboratory of Biotherapy and Cancer Center,West China Hospital,Sichuan University and Collaborative Innovation Center of Biotherapy,Chengdu 610041,China
  • 2. Division of Endocrinology and Metabolism,West China School of Medicine/West China Hospital,Sichuan University,Chengdu 610041,China
  • 3. Department of Endocrinology and Metabolism,Affiliated Hospital of North Sichuan Medical College,North Sichuan Medical College,Nanchong 637000,China
  • 4. Division of Endocrinology and Metabolism,National Clinical Research Center for Geriatrics,State Key Laboratory of Biotherapy and Cancer Center,West China Hospital,Sichuan University and Collaborative Innovation Center of Biotherapy,Chengdu 610041,China
  • 5. Department of Laboratory Medicine,State Key Laboratory of Biotherapy,Med-X Center for Manufacturing,West China Hospital,Sichuan University and Collaborative Innovation Center,Chengdu 610041,China;Tianfu Jincheng Laboratory,City of Future Medicine,Chengdu 641400,China
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Abstract

Diagnostic C9orf72 hexanucleotide repeat expansions(C9-HRE)is essential for the early and accurate di-agnosis of amyotrophic lateral sclerosis(ALS)and will provide support for the prognosis and gene therapy of ALS.In the present study,by combining catalytic hairpin assembly(CHA)with Mycobacterium smegma-tis porin A(MspA)nanopore,a new nanopore-based strategy for the detection of C9-HRE was reported.Less than 30 repeats of C9-HRE could be detected via this method,and the results have the potential to help distinguish between patients and healthy individuals.Moreover,the method demonstrated its great specificity for C9-HRE by identifying other repeat expansions.Given the high selectivity,this approach had been successfully used to detect C9-HRE in cell and blood samples with high accuracy.This detec-tion strategy is user-friendly and has a strong anti-interference ability,thus providing a powerful tool for clinical diagnosis.

Key words

MspA nanopore/C9orf72 HRE/Detection/Biosensor/Catalytic hairpin assembly

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基金项目

国家重点研发计划(2022YFB3205600)

国家自然科学基金(82004341)

中国博士后科学基金(2022M712286)

四川省科技计划(2020JDTD0022)

Sichuan Administration of Traditional Chinese Medicine(2023MS078)

Sichuan University Postdoctoral Interdisciplinary Innovation Fund(JCXK2225)

出版年

2024
中国化学快报(英文版)
中国化学会

中国化学快报(英文版)

CSTPCD
影响因子:0.771
ISSN:1001-8417
参考文献量39
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