Characteristics of short double stranded RNA against hepatitis C virus: a literature-based analysis

WU Wenbin

Characteristics of short double stranded RNA against hepatitis C virus: a literature-based analysis

WU Wenbin1
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作者信息

  • 1. Department of Epidemiology, Institute of Navy Medicine, Shanghai 200433, China
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Abstract

Objective:To describe the characteristics of short interfering double stranded RNA (dsRNA) against hepatitis C virus (HCV) and to find out the determining factors in design for desirable inhibitory efficacy.Methods:The data were collected and analyzed by retrieval of 229 published short dsRNAs designed for degradation ofHCV RNA.Results:Statistical analyses showed that the most frequently involved short dsRNAs were directing against 5‘NTR/core and genotype lb,accounting for 64.2% and 69.9%,respectively.Inhibitory efficacy varied with the structural characteristics of short dsRNAs,of which the most potential were those directed against HCV core region with inhibitory efficacy of 70.2%.Moreover,the mean inhibitory efficacy of short dsRNAs with GC contents from 30% to 52% was higher than that of those with GC contents out of this range.Conclusion:Based on this pooled data in a relatively large sample,the present results provided clues to design for short dsRNAs with more potent inhibitory efficacy.

Key words

Hepatitis C virus/Short double stranded RNA, Small interfering RNA/Short hairpin RNA/RNA interference

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基金项目

Supported by Grants from the Committee of Science and Technology of Shanghai,China(10ZR1413100)

Supported by Grants from the Committee of Science and Technology of Shanghai,China()

Supported by Grants from the Committee of Science and Technology of Shanghai,China(No.114119a1400)

出版年

2013
中国人民解放军军医大学学报(英文版)
第一(现南方医科大学),二,三,四军医大学

中国人民解放军军医大学学报(英文版)

影响因子:0.245
ISSN:1000-1948
参考文献量48
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