首页|动物双歧杆菌乳亚种i797菌株特异性量化分析方法研究

动物双歧杆菌乳亚种i797菌株特异性量化分析方法研究

Real-time PCR assays for the strain-specific detection of Bifidobacterium animalis subsp.lactis i797

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动物双歧杆菌乳亚种i797(Bifidobacterium animalis subsp.lactis i797)是一株具有改善小儿腹泻和消化不良功能的潜在益生菌.通过与其它22株动物双歧杆菌乳亚种菌株进行全基因组测序-单核苷酸多态性(Whole Genome Sequencing-Single Nucleotide Polymor-phism,WGS-SNP)分析,确定了 i797菌株位于K1717_01615基因上的一个特异性位点.根据该位点设计引物及探针,基于荧光定量PCR建立了 i797菌株的量化分析方法.结果表明,所选位点可以有效区分i797与其它18株双歧杆菌,且在传代40次过程中表现出较强的稳定性.该检测方法对于i797菌株DNA浓度和菌液浓度的灵敏度分别为1.5 pg和104 CFU/mL,重复性和重现性检测结果的相对标准偏差分别小于2%和6%,并且对于高浓度同亚种菌株ATCC 27673的抗干扰能力较强.利用该方法可以实现复合益生菌产品中i797菌株的准确量化分析,为益生菌产品的质量控制和合规性评估提供了有效的解决方案.
Bifidobacterium animalis subsp.lactis i797,a probiotic strain with potential therapeutic applications in paediatric diarrhoea and dyspepsia,was subjected to a comprehensive Whole Genome Sequencing-Single Nucleotide Polymorphism(WGS-SNP)analysis among a set of 23 strains.This analysis identified a unique genomic locus on the K1717_01615 gene that is exclusive to strain i797.Utilizing this locus,we developed primers and probes for a fluorescence quantitative PCR-based quantitative analysis method.The method was capable of distinguishing strain i797 from 18 other Bifidobacterium strains,and demonstrated stability over 40 passages.Sensitivities for DNA concentrations and cell densities of strain i797 were established at 1.5 pg and 104 CFU/mL,respectively.In terms of repeatability and reproducibility,the relative standard deviations of the method were found to be below 2%and 6%,respectively.In addition,the method demonstrated strong anti-interference properties for high cell densities of the same subspecies of strain ATCC 27673.This method enables precise quantitative analysis of strain i797 in complex probiotic prod-ucts.The study presents an innovative strain-specific quantitative analysis method that can be used as a potent tool for ensuring the quality control and compliance assessment of probiotic products.

Bifidobacterium animalis subsp.lactisWGS-SNPstrain-specificityqPCR

赵磊、张栋、刘洋

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上海市质量监督检验技术研究院 国家市场监管重点实验室(乳及乳制品检测与监控技术),上海 200233

君乐宝乳业集团股份有限公司,石家庄 050221

动物双歧杆菌乳亚种 全基因组测序-单核苷酸多态性 株水平检测 定量PCR

国家市场监督管理总局技术保障专项

2023YJ16

2024

中国乳品工业
黑龙江乳品工业技术开发中心,中国乳制品工业协会

中国乳品工业

CSTPCD北大核心
影响因子:0.41
ISSN:1001-2230
年,卷(期):2024.52(5)
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