中国兽医学报2024,Vol.44Issue(8) :1698-1703.DOI:10.16303/j.cnki.1005-4545.2024.08.16

检测寨卡病毒核酸的RT-LAMP可视化方法的建立

A visual RT-LAMP-VF method for detection of Zika virus nucleic acid

宋雨濛 黄培 金宏丽 焦翠翠 白玉洁 张梦瑶 龚志远 李媛媛 张海丽 王化磊
中国兽医学报2024,Vol.44Issue(8) :1698-1703.DOI:10.16303/j.cnki.1005-4545.2024.08.16

检测寨卡病毒核酸的RT-LAMP可视化方法的建立

A visual RT-LAMP-VF method for detection of Zika virus nucleic acid

宋雨濛 1黄培 1金宏丽 2焦翠翠 1白玉洁 1张梦瑶 1龚志远 1李媛媛 1张海丽 1王化磊1
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作者信息

  • 1. 吉林大学动物医学学院人畜共患传染病重症诊治全国重点实验室/教育部人兽共患病研究重点实验室,吉林长春 130062
  • 2. 长春西诺生物科技有限公司,吉林长春 130012
  • 折叠

摘要

为建立简单、便捷、灵敏、特异的寨卡病毒(Zika virus,ZIKV)快速检测方法,本研究通过对不同时间、不同地区分离的ZIKV全基因组序列进行分析,筛选ZIKV NS5基因保守区为靶标,同时设计特异性引物及探针,结合RT-LAMP 恒温扩增技术和免疫层析技术,成功构建ZIKV反转录环介导等温扩增核酸可视化(RT-LAMP-VF)检测方法.结果显示,该方法具有良好的特异性和敏感性,当内、外、环引物比为FIP∶LF∶F3=4∶2∶1时,在61 ℃条件下恒温扩增45 min,可特异性检测到102 copies/μL的RNA标准品以及2.15 pfu的ZIKV,且与其他黄病毒(日本乙型脑炎病毒、猪瘟病毒)等无交叉反应.血液组织中的其他RNA不影响RT-LAMP-VF的敏感性和特异性,表明该方法可用于临床样本ZIKV的检测.本研究建立的ZIKV RT-LAMP-VF检测方法操作简单、不需要特殊仪器设备,尤其适用于基层单位ZIKV的现场快速检测,为ZIKV病的现场快速检测和预警预报体系的建立提供技术支持与物质保障.

Abstract

To establish a simple,convenient,sensitive,and specific method for rapid detection of Zi-ka virus(ZIKV),the whole genome sequences of ZIKV isolated from different times and regions were analyzed.The specific primers and probes were designed based on the screened target se-quences located in the conserved region of the ZIKV NS5 gene.By combining RT-LAMP isother-mal amplification technology and immunochromatography technology,a reverse transcription loop mediated isothermal amplification nucleic acid and flow visualization strip(RT-LAMP-VF)detec-tion method for ZIKV was established.The results showed that the method had good specificity and sensitivity.When the ratio of inner,outer,and ring primers(FIP∶LF∶F3)was 4∶2∶1,the detection method can specifically detect 102 copies/pL RNA transcripts or 2.15 pfu ZIKV at 61 ℃for 45 minutes,with no cross reaction with other flaviviruses such as Japanese encephalitis virus and classical swine fever virus.Other RNAs in blood tissue samples did not affect the sensitivity and specificity of RT-LAMP-VF,indicating that the method can be applied to clinical practice.The ZIKV RT-LAMP-VF detection method established in this study is easy to perform and does not require special instruments and equipment.It is particularly suitable for the rapid detection of ZIKV in grassroots units,providing technical support and material support for the establishment of on-site rapid detection and early warning and prediction systems for ZIKV disease.

关键词

寨卡病毒/环介导等温扩增/免疫层析试纸条/核酸可视化检测

Key words

Zika virus/RT-LAMP/immunochromatography/nucleic acid test

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基金项目

国家重点研发计划基金资助项目(2021YFF0703600)

出版年

2024
中国兽医学报
吉林大学

中国兽医学报

CSTPCDCSCD北大核心
影响因子:0.702
ISSN:1005-4545
参考文献量9
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