中国现代普通外科进展2024,Vol.27Issue(4) :286-291.DOI:10.3969/j.issn.1009-9905.2024.04.007

高通量RNA测序技术分析结肠腺瘤转变为结肠癌的关键基因

Analysis of key genes in the development from colon adeno-ma to carcinoma through high-throughput RNA sequencing

边杰 王涛 叶长春 高根旺 麻春宏 孙学军 孙祺
中国现代普通外科进展2024,Vol.27Issue(4) :286-291.DOI:10.3969/j.issn.1009-9905.2024.04.007

高通量RNA测序技术分析结肠腺瘤转变为结肠癌的关键基因

Analysis of key genes in the development from colon adeno-ma to carcinoma through high-throughput RNA sequencing

边杰 1王涛 1叶长春 1高根旺 1麻春宏 1孙学军 1孙祺1
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作者信息

  • 1. 西安交通大学第一附属医院 普通外科(陕西 西安 710061)
  • 折叠

摘要

目的:通过RNA测序技术分析比较正常结肠组织、结肠腺瘤及癌组织中基因表达谱的差异,识别从结肠腺瘤发展为结肠癌过程中的关键基因,并探究其潜在机制.方法:对同一患者的正常结肠组织、腺瘤及癌组织进行RNA测序分析,识别在结肠癌中显著表达、腺瘤组织中不显著表达的差异基因并进行GO和KEGG功能富集分析.结果:在结肠癌中显著表达、腺瘤组织中不显著表达的差异基因有4307个,其中5个差异最大的基因是EPYC、LINC01614、MCEMP1、NOX4、CLEC5A.对这些基因进行GO和KEGG功能富集分析发现,主要富集于生物过程调节、细胞过程调节、蛋白质结合等生物学过程和癌症通路、PI3K-Akt 信号通路、MAPK 信号通路等.结论:EPYC、LINC01614、MCEMP1、NOX4、CLEC5A 等多个基因参与结肠腺瘤到结肠癌发展的过程,这些基因有望成为结直肠癌的治疗靶点.

Abstract

Objective:To analyze and compare the difference of gene expression profiles in normal colon tissues,colon adenoma and carcinoma tissues by RNA sequencing technology,and re-veal the key genes and potential mechanisms in the development from colon adenoma to carcinoma.Methods:RNA sequencing analysis was carried out on normal colon tissues,colon adenomas and carcinoma tissues of the same patient,and differential genes that were significantly expressed in colon cancer and not significantly expressed in adenoma tissues were obtained,and the GO and KEGG function enrichment analysis was performed.Results:There are 4307 differential genes that are significantly expressed in colon cancer and not significantly expressed in adenoma.The GO and KEGG function enrichment analysis of these genes found that they were mainly enriched in bi-ological processes such as biological process regulation,cell process regulation,protein binding and cancer pathway,PI3K Akt signal pathway MAPK signal pathway.Conclusion:There are many genes involved in the development process from colon adenoma to carcinoma.These genes have the potential to become therapeutic targets for colorectal cancer,providing a new direction for fol-low-up research on colorectal cancer.

关键词

结肠癌/结肠腺瘤/RNA测序

Key words

Colon carcinoma/Colon adenoma/RNA sequencing

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基金项目

国家自然科学基金(81972720)

出版年

2024
中国现代普通外科进展
山东大学

中国现代普通外科进展

CSTPCD
影响因子:0.993
ISSN:1009-9905
参考文献量13
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