首页|十二指肠贾第虫包囊壁蛋白CWP2和CWP3的表达纯化与生物信息学分析

十二指肠贾第虫包囊壁蛋白CWP2和CWP3的表达纯化与生物信息学分析

Expression,purification and bioinformatics analysis of cysts wall proteins CWP2 and CWP3 in Giardia duodenalis

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为体外表达与纯化十二指肠贾第虫包囊壁蛋白CWP2和CWP3并分析其生物信息学特征,本研究采用PCR从十二指肠贾第虫全基因组中扩增CWP2与CWP3基因,并构建重组表达载体pET-28a-CWP2和pET-28a-CWP3,经酶切与测序鉴定正确后转化大肠杆菌BL21(DE3)感受态细胞,经IPTG诱导后超声破碎,采用尿素纯化蛋白并经SDS-PAGE和western blot检测重组蛋白的表达与纯化效果.SDS-PAGE结果显示,表达的重组CWP2和CWP3蛋白(rCWP2及rCWP3)分别为38.79 ku和27.38 ku,且两种重组蛋白主要以包涵体形式表达,纯化后的蛋白条带单一且纯度均大于90%;western blot结果显示纯化的两种重组蛋白与His-tag单克隆抗体(MAb)的反应原性均较好.采用BCA法测定rCWP2及rCWP3的浓度分别为0.207 mg/mL及0.465 mg/mL.通过Prot Param、Prot Scale、Singal P 6.0、Deep TMHMM、NetPhos 3.1、SOPMA、SWISS MODEL和STRING等生物信息学软件预测这两个重组蛋白的生物信息学特性.结果显示,十二指肠贾第虫CWP2和CWP3分别为不稳定性和稳定性蛋白,有信号肽,无跨膜区,各有39个和25个磷酸化位点,均形成了氧化(O)-磷酸化.CWP2和CWP3的主要二级结构为α-螺旋和无规则卷曲;预测的三级结构模型中CWP2和CWP3与十二指肠贾第虫WB克隆C6株及P15株中的E2RTS7.1.A和E1F7Q8.1.A氨基酸序列的同源性分别达100%及90.69%.三级结构模型显示这两个蛋白也均以α-螺旋和无规则卷曲为主,与二级结构相符;CWP2与α-1贾第素、DNA解旋酶等7个蛋白存在相互作用关系;CWP3与α-2贾第素、δ-贾第素和β-贾第素存在相互作用关系.上述结果表明,本研究获得了高纯度高水平表达的rCWP2及rCWP3,且反应原性均较强,并分析了二者的主要生物信息学特征,为十二指肠贾第虫包囊壁蛋白的深入探究奠定了基础.
In order to express and purify Giardia duodenalis cyst wall proteins CWP2 and CWP3 in vitro and analyze their bioinformatic characteristics,this study amplified the CWP2 and CWP3 genes from the whole genomic DNA of G.duodenalis by PCR.The expression plasmids pET-28a-CWP2 and pET-28a-CWP3 were constructed and transformed into E.coli BL21(DE3)competent cells after enzyme digestion and sequencing identification.After IPTG induction and ultrasonication,the protein was purified by urea and detected by SDS-PAGE and western blot.The SDS-PAGE results showed that the recombinant CWP2 and CWP3(rCWP2 and rCWP3)were 38.79ku and 27.38ku,respectively,and the two recombinant proteins were mainly expressed in the form of inclusion bodies.The purified protein bands were single and the purity was more than 90%.Western blot results showed that the two recombinant proteins had good reactogenicity with His-tag MAb.Measued by BCA method,the concentrations of rCWP2 and rCWP3 were 0.207mg/mL and 0.465mg/mL respectively.The bioinformatics properties of these two recombinant proteins were predicted by bioinformatics software such as Prot Param,Prot Scale,Singal P 6.0,Deep TMHMM,Net Phos 3.1,SOPMA,SWISS MODEL and STRING.The results showed that G.duodenalis CWP2 and CWP3 were unstable and stable proteins,respectively;each of them had a signal peptide,but no transmembrane region;CWP2 and CWP3 had 39 and 25 phosphorylation sites respectively,and all formed oxidative(O)phosphorylation;the main secondary structures of CWP2 and CWP3 were α-folded and irregularly coiled;the predicted tertiary structure model of CWP2 showed 100%homology to E2RTS7.1.A of G.duodenalis WB clones C6 strain;the predicted tertiary structure model of CWP3 showed 90.69%homology to E1F7Q8.1.A of G.duodenalis WB clone P15 strains;the tertiary structure model also showed that the two proteins were mainly α-helix and random coil,which was consistent with the secondary structure;the STRING software predicted that the CWP2 interacts with seven proteins,including α-1 giardin,DNA helicase,and CWP3 interacts with α-2 giardin,δ-giardin and β-giardin.The above results showed that high purity rCWP2 and rCWP3 were obtained in this study,and both had good reactogenicty,the main bioinformatics characteristics of the two were analyzed,which lays the foundation for further exploration of cystal wall proteins in G.duodenalis.

Giardia duodenaliscyst wallproteinprokaryotic expressionpurificationbioinformatics analysis

张雅芳、吴善博、邵天人、边啸坤、孙露露、王荣军

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河南农业大学动物医学院,河南郑州 450046

十二指肠贾第虫 囊壁蛋白 原核表达 纯化 生物信息学分析

国家自然科学基金-河南省联合基金

U2004155

2024

中国预防兽医学报
中国农业科学院哈尔滨兽医研究所

中国预防兽医学报

CSTPCD北大核心
影响因子:0.674
ISSN:1008-0589
年,卷(期):2024.46(3)
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