中国优生与遗传杂志2024,Vol.32Issue(2) :336-341.

Cardiac-Urogenital综合征胎儿的基因变异分析

Genetic variation analysis of fetus with Cardiac-Urogenital syndrome

武辉艳 陈雪 马盼盼 张庆华 郝胜菊 周秉博
中国优生与遗传杂志2024,Vol.32Issue(2) :336-341.

Cardiac-Urogenital综合征胎儿的基因变异分析

Genetic variation analysis of fetus with Cardiac-Urogenital syndrome

武辉艳 1陈雪 1马盼盼 1张庆华 1郝胜菊 1周秉博1
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作者信息

  • 1. 甘肃省妇幼保健院/甘肃省中心医院医学遗传中心,甘肃兰州 730050;甘肃省出生缺陷与罕见病临床研究中心,甘肃兰州 730050
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摘要

目的 探讨Cardiac-Urogenital综合征(CUGS)胎儿的遗传学特征,以明确病因并提供遗传咨询和生育指导.方法 选取2022年甘肃省妇幼保健院确诊的1例CUGS胎儿为研究对象.采集胎儿羊水及其父母的外周血,提取基因组DNA,进行家系全外显子测序(trio-WES)及低通量全基因组测序(CNV-seq).应用Sanger测序技术对可疑致病突变位点进行家系验证.结果 trio-WES检测结果显示胎儿MYRF基因第25内含子存在c.3301-2A>C经典剪切变异,为自发杂合变异,父母均为野生型.该变异未检索到相关文献报道,在普通人携带频率数据库如千人基因组、gnomAD等中均未收录,为新发变异.按照美国医学遗传学与基因组学学会(ACMG)指南评估为可能致病性(likely pathogenic,PVS1+PM2_Supporting)变异.结论 基于超声结合全外显子组测序可快速、可靠地确诊CUGS患儿,为临床对胎儿的决策提供支持.同时,我们发现MYRF基因的1个新发且自发突变,国内外均未见报道,扩充了 MYRF基因致病突变谱,为疾病的临床诊断和遗传咨询提供理论依据.

Abstract

Objective To investigate the genetic characteristics of fetuses with Cardiac-Urogenital syndrome(CUGS)in order to clarify the etiology and provide genetic counseling and fertility guidance.Methods One fetus with CUGS diag-nosed in Gansu Provincial Maternity and Child-care Hospital in 2022 was selected as the study population.Fetal amniotic fluid and peripheral blood of its parents were collected,genomic DNA was extracted,and family whole exome sequencing(trio-WES)and low throughput whole genome sequencing(CNV-seq)were performed.Sanger sequencing technology was applied to perform lineage validation of suspected pathogenic mutation loci.Results trio-WES showed the presence of the c.3301-2A>C classical shear variant in intron 25 of the fetal MYRF gene,which was a de novo heterozygous variant with both parents being wild type.This variant was not retrieved from the literature and was not included in the general human carrier frequency databases such as thousand genomes,gnomAD,etc.It is a rare variant.The variant was assessed as likely patho-genic(PVS1+PM2_Supporting)according to the American College of Medical Genetics and Genomics(ACMG)guidelines.Conclusion Ultrasound-based combined with whole-exome sequencing can rapidly and reliably confirm the diagnosis of chil-dren with CUGS and support clinical decision making in fetuses.Meanwhile,we identified one novel and spontaneous muta-tion in MYRF gene,which has not been reported at home and abroad,expanding the spectrum of pathogenic mutations in MYRF gene and providing theoretical basis for clinical diagnosis and genetic counseling of the disease.

关键词

Cardiac-Urogenital综合征/MYRF基因/先心病/心脏畸形/生物信息学分析

Key words

Cardiac-Urogenital syndrome/MYRF gene/congenital heart disease/cardiac malformation/bioinfor-matics analysis

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基金项目

甘肃省科技计划(21JR7RA680)

出版年

2024
中国优生与遗传杂志
中国优生科学协会

中国优生与遗传杂志

CSTPCD
影响因子:0.527
ISSN:1006-9534
参考文献量16
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