首页|川贝母HSP70家族基因鉴定及高温胁迫下不同组织的表达分析

川贝母HSP70家族基因鉴定及高温胁迫下不同组织的表达分析

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热激蛋白 70(heat shock protein 70,HSP70)是植物响应逆境胁迫的一类应激蛋白,在生物体内分布广,具有高度保守性.为解析川贝母响应高温胁迫的分子机制,该研究利用川贝母根、鳞茎、茎、叶、果不同组织的转录组数据,通过生物信息学方法对HSP70 家族基因进行鉴定与筛选,并采用qRT-PCR技术分析其在高温(35℃)胁迫下的表达模式.结果显示,共鉴定出 26 个川贝母HSP70 成员,分别命名为FcHSP70-1~FcHSP70-26,编码蛋白的氨基酸数量为 560~944 个,相对分子质量为61.64~100.01 kDa,理论等电点为 5.00~6.59,蛋白质二级以无规卷曲和α-螺旋为主.亚细胞定位预测分析表明,FcHSP70s在线粒体、叶绿体、细胞核、内质网和细胞质中均有分布.系统进化树分析表明,26 个川贝母FcHSP70s中 7 个属于Dnak亚家族,19 个属于HSP110/SSE亚家族.在 35℃处理下,FcHSP70-5、FcHSP70-8、FcHSP70-17、FcHSP70-18 和FcHSP70-23 在川贝母5 个组织中的表达量均显著上升,最高上调倍数为 156.54,推测在川贝母植株响应高温胁迫中起主要作用.另外相较于其他组织,茎和叶片对高温最为敏感,在 18 个基因中的平均上调倍数分别为 18.18、8.03,说明川贝母主要感受高温的组织可能是茎和叶片.该研究为深入解析HSP70 家族基因在川贝母高温胁迫中的功能奠定基础.
Identification of HSP70 gene family members in Fritillaria cirrhosa and expression analysis in different tissues under high temperature stress
The heat shock protein 70 family contains the stress proteins ubiquitous in plants.These proteins are involved in the re-sponses to different abiotic stress conditions and have highly conserved gene sequences.However,little is known about the molecular mechanisms of Fritillaria cirrhosa in response to high-temperature stress.Here,26 HSP70s,FcHSP70-1 to FcHSP70-26,were identi-fied from the transcriptome data of root,bulb,stem,leaf,and fruit samples of F.cirrhosa.The proteins encoded by FcHSP70s had the lengths ranging from 560 aa to 944 aa,with the molecular weight of 61.64-100.01 kDa and the theoretical isoelectric point between 5.00 and 6.59.The secondary structural elements of HSP70s were mainly random coils and α-helixes.Subcellular localization predic-tion revealed that FcHSP70s were distributed in mitochondria,chloroplasts,nuclei,endoplasmic reticulum,and cytoplasm.The phylo-genetic tree showed that 7 members of the HSP70 family belonged to the Dnak subfamily and 19 members belonged to the HSP110/SSE subfamily.In addition,the qRT-PCR results showed that the expression of FcHSP70-5,FcHSP70-8,FcHSP70-17,FcHSP70-18,and FcHSP70-23 in F.cirrhosa was significantly up-regulated at 35℃,which indicated that these genes might play a role in the response to high temperature stress.In addition,compared with other tissues,stems and leaves were sensitive to high temperature stress,with the expression of 18 genes up-regulated by 18.18 and 8.03 folds on average,respectively.These findings provide valuable information about the molecular mechanism of HSP70s of F.cirrhosa in response to high temperature stress.

Fritillaria cirrhosaHSP70high temperature stressbioinformatics

张晓玉、余济辰、陈文涛、周芏延、袁媛、刘鸿高、梁艳丽

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云南农业大学 西南中药材种质创新与利用国家地方联合工程研究中心,云南 昆明 650201

云南农业大学 云南省药用植物生物学重点实验室,云南 昆明 650201

云南农业大学 农学与生物技术学院,云南 昆明 650201

川贝母 HSP70 高温胁迫 生物信息学

云南省科技厅科技重大专项迪庆州科技计划云南省科技计划云南省科技厅乡村振兴科技专项云南省重大专项

202302AA3100302023ZXND01202102AA310031202304BI090009202102AA310045

2024

中国中药杂志
中国药学会

中国中药杂志

CSTPCD北大核心
影响因子:1.718
ISSN:1001-5302
年,卷(期):2024.49(9)
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