针灸和草药(英文)2024,Vol.4Issue(1) :122-133.DOI:10.1097/HM9.0000000000000098

整合因果推断模型揭示慢性疲劳综合征新的致病因果因素和清金益气颗粒的潜在治疗靶点

Integrated causal inference modeling uncovers novel causal factors and potential therapeutic targets of Qingjin Yiqi granules for chronic fatigue syndrome

李俊蓉 翟小兵 刘吉星 林子健 孟维宇 王跃飞 李舒 王亚鹏 李克峰
针灸和草药(英文)2024,Vol.4Issue(1) :122-133.DOI:10.1097/HM9.0000000000000098

整合因果推断模型揭示慢性疲劳综合征新的致病因果因素和清金益气颗粒的潜在治疗靶点

Integrated causal inference modeling uncovers novel causal factors and potential therapeutic targets of Qingjin Yiqi granules for chronic fatigue syndrome

李俊蓉 1翟小兵 2刘吉星 2林子健 1孟维宇 2王跃飞 3李舒 2王亚鹏 1李克峰2
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作者信息

  • 1. 应用科学学院,澳门理工大学,澳门
  • 2. 应用科学学院人工智能驱动药物发现中心,澳门理工大学,澳门
  • 3. 天津中医药大学,天津;海河现代中医药实验室,天津
  • 折叠

摘要

慢性疲劳综合征(CFS)是一种复杂的多因素疾病,也是新冠肺炎(COVID-19)的一种常见后遗症.CFS的病因和发病机制目前尚不清楚,这给其诊断和治疗带来很大挑战.早期研究表明,CFS可能与神经内分泌和免疫调节机制紊乱、慢性病毒感染以及心理因素等有关,但多采用横断面研究设计,难以判断明确的因果关系.清金益气颗粒是临床证明的有效的预防和治疗COVID-19后遗症的中药方剂,但其作用靶点尚不完全明确.为进一步阐明CFS的致病因素以及清金益气治疗CFS的作用靶点,我们首先开展了一个长周期前瞻性队列研究(随访时间7年),通过因果图学习的方法发现慢性咳嗽和失眠是CFS发病的潜在因果因素,并应用多种统计模型和亲属队列验证了结果的稳健性.基于此,我们进一步运用全基因组双样本孟德尔随机化分析,估算与CFS相关病因(慢性咳嗽和失眠)相关的药物靶点蛋白,最后,我们通过虚拟筛选和分子对接技术评估了清金益气颗粒主要化学成分与这些靶标蛋白的结合能力,阐明了其预防CFS的可能作用机制.

Abstract

Objective:Chronic fatigue syndrome(CFS)is a prevalent symptom of post-coronavirus disease 2019(COVID-19)and is associated with unclear disease mechanisms.The herbal medicine Qingjin Yiqi granules(QJYQ)constitute a clinically approved formula for treating post-COVID-19;however,its potential as a drug target for treating CFS remains largely unknown.This study aimed to identify novel causal factors for CFS and elucidate the potential targets and pharmacological mechanisms of action of QJYQ in treating CFS.Methods:This prospective cohort analysis included 4,212 adults aged ≥65 years who were followed up for 7 years with 435 incident CFS cases.Causal modeling and multivariate logistic regression analysis were performed to identify the potential causal determinants of CFS.A proteome-wide,two-sample Mendelian randomization(MR)analysis was employed to explore the proteins associated with the identified causal factors of CFS,which may serve as potential drug targets.Furthermore,we performed a virtual screening analysis to assess the binding affinity between the bioactive compounds in QJYQ and CFS-associated proteins.Results:Among 4,212 participants(47.5%men)with a median age of 69 years(interquartile range:69-70 years)enrolled in 2004,435 developed CFS by 2011.Causal graph analysis with multivariate logistic regression identified frequent cough(odds ratio:1.74,95%confidence interval[Cl]:1.15-2.63)and insomnia(odds ratio:2.59,95%Cl:1.77-3.79)as novel causal factors of CFS.Proteome-wide MR analysis revealed that the upregulation of endothelial cell-selective adhesion molecule(ESAM)was causally linked to both chronic cough(odds ratio:1.019,95%Cl:1.012-1.026,P=2.75 e-05)and insomnia(odds ratio:1.015,95%Cl:1.008-1.022,P=4.40 e-08)in CFS.The major bioactive compounds of QJYQ,ginsenoside Rb2(docking score:-6.03)and RG4(docking score:-6.15),bound to ESAM with high affinity based on virtual screening.Conclusions:Our integrated analytical framework combining epidemiological,genetic,and in silico data provides a novel strategy for elucidating complex disease mechanisms,such as CFS,and informing models of action of traditional Chinese medicines,such as QJYQ.Further validation in animal models is warranted to confirm the potential pharmacological effects of QJYQ on ESAM and as a treatment for CFS.

关键词

因果因素/因果图分析/慢性疲劳综合征/药物靶点/孟德尔随机化/清金益气颗粒

Key words

Causal factors/Causal graph analysis/Chronic fatigue syndrome/Drug targets/Mendelian randomization/Qingjin Yiqi

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基金项目

an internal fund from Macao Polytechnic University(RP/FCSD-02/2022)

出版年

2024
针灸和草药(英文)
天津中医药大学,中华中医药学会

针灸和草药(英文)

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参考文献量34
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