预防医学2024,Vol.36Issue(1) :70-73,77.DOI:10.19485/j.cnki.issn2096-5087.2024.01.018

结核潜伏感染和活动性结核病患者血浆外泌体mRNA表达谱分析

Expression profile of mRNA sequencing for plasma exosomes among patients with latent tuberculosis infection and active tuberculosis

高锦 杜孝康 项海燕 范超明 蔡成松 潘峰
预防医学2024,Vol.36Issue(1) :70-73,77.DOI:10.19485/j.cnki.issn2096-5087.2024.01.018

结核潜伏感染和活动性结核病患者血浆外泌体mRNA表达谱分析

Expression profile of mRNA sequencing for plasma exosomes among patients with latent tuberculosis infection and active tuberculosis

高锦 1杜孝康 1项海燕 2范超明 1蔡成松 1潘峰1
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作者信息

  • 1. 杭州师范大学附属医院检验科,浙江杭州 310015
  • 2. 杭州师范大学附属医院,浙江杭州 310015
  • 折叠

摘要

目的 了解结核潜伏感染(LTBI)和活动性结核病(ATB)患者血浆外泌体差异mRNA表达,为鉴别诊断LTBI与ATB提供参考.方法 选择杭州师范大学附属医院确诊的ATB患者21例和LTBI患者16例,使用外泌体提取纯化试剂盒分离血浆外泌体,通过透射电镜观察其大小形态,采用免疫印迹法鉴定;提取血浆外泌体总RNA进行高通量测序;鉴定差异表达mRNA,并进行基因本体论(GO)分析和京都基因与基因组百科全书(KEGG)通路分析;筛选差异表达倍数最大的mRNA,另选取ATB患者5例和LTBI患者3例,采用实时荧光定量PCR法进行临床样本验证.结果 高通量测序结果显示,与ATB患者比较,LTBI患者血浆外泌体有2 875个差异表达mRNA,其中1 873个表达下调,以M6PR的差异表达倍数最大;表达上调1 002个,以RGPD5的差异表达倍数最大.GO富集分析和KEGG通路分析结果显示,差异表达mRNA主要富集于丝氨酸蛋白激酶激活、rRNA结合等分子功能,以及人巨细胞病毒感染、胰腺癌、子宫内膜癌、胰岛素信号通路和FoxO信号通路等.临床样本验证结果显示,LTBI患者血浆外泌体M6PR相对表达量(0.954±0.212)较 ATB 患者(2.168±0.226)下调,RGPD5 相对表达量(2.126±0.200)较 ATB 患者上调(0.588±0.129)(均P<0.05).结论 LTBI患者和ATB患者血浆外泌体中mRNA表达存在差异,M6PR和RGPD5可考虑作为区分LTBI与ATB的潜在生物标志物.

Abstract

Objective To analyse the expression of differential mRNA in the plasma exosomes in patients with latent tu-berculosis infection(LTBI)and active tuberculosis(ATB)using high-throughput sequencing,so as to provide insights in-to differential diagnosis of LTBI and ATB.Methods The plasma samples were collected from the patients treated at The Affiliated Hospital of Hangzhou Normal University,including 16 cases of LTBI and 21 cases of ATB.The exo-somes were extracted by Invitrogen extracellular extracts purification kit,and the size and morphology of exosomes were observed by transmission electron microscope(TEM).The exosomes were identified by Western blotting.Total RNA was extracted from plasma exosomes using high-throughput sequencing,differential expression mRNA was identified,and gene ontology(GO)analysis and Kyoto Encyclopedia of Genes and Genomes(KEGG)pathway analysis were performed.Two differential mRNAs with the highest differential expression fold were selected,and five patients with ATB and three patients with LTBI wererecruited for verification using real-time quantitative PCR.Results The sequencing re-suits of plasma exosomes showed that compared with ATB patients,2 875 differentially expressed mRNAs were detected in exosomes of LTBI patients,of which 1 002 mRNAs were up-regulated and 1 873 mRNAs were down-regulated.The most significant differentially expressed downregulated and upregulated mRNA were M6PR and RGPD5,respectively.GO analysis and KEGG pathway analysis showed that differential mRNAs were enriched in protein serine kinase activity,rRNA binding molecular function,human cytomegalovirus infection,pancreatic cancer,endometrial cancer,insulin sig-naling pathway and FoxO signaling pathway.The real-time quantitative PCR showed that the expression of differential mRNA was consistent with sequencing.Compared with ATB patients,the relative expression level of M6PR in plas-ma exosomes in LTBI patients(0.954±0.212)was downregulated compared with that of ATB patients(2.168±0.226),while the relative expression level of RGPD5(2.126±0.200)was upregulated compared with that of ATB patients(0.588±0.129)(both P<0.05).Conclusions There is a difference in mRNA expression of plasma exosomes between patients with LTBI and ATB.M6PR and RGPD5 may become markers for distinguishing plasma exosomes between LTBI and ATB.

关键词

结核潜伏感染/活动性结核病/外泌体/mRNA/高通量测序

Key words

latent tuberculosis infection/active tuberculosis/exosome/mRNA/high-throughput sequencing

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基金项目

浙江省医药卫生科技计划项目(2021KY888)

浙江省医药卫生科技计划项目(2019KY500)

出版年

2024
预防医学
浙江省预防医学会

预防医学

CSTPCD
影响因子:1.002
ISSN:2096-5087
参考文献量16
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