首页|基于网络药理学与分子对接技术探讨延胡索-鹿衔草药对治疗癌症疼痛的作用机制

基于网络药理学与分子对接技术探讨延胡索-鹿衔草药对治疗癌症疼痛的作用机制

扫码查看
目的:基于网络药理学与分子对接技术探讨延胡索-鹿衔草药对治疗癌症疼痛的作用机制.方法:在中药系统药理学数据库与分析平台(TCMSP)中分别检索延胡索、鹿衔草的成分及作用靶点,并对照UniPort蛋白数据库进行匹配、校正、筛选,获取药物的最终靶点,并将结果导入Cytoscape3.9.0 构建药物-成分-靶点图.分别在GeneCards数据库和OMIM数据库筛选癌症疼痛的靶点.在Venny 2.1.0 中,导入药物靶点与疾病靶点,绘制韦恩图,取得交集靶点.再将交集靶点通过STRING网站、Cytoscape3.9.0 进行拓扑分析,筛选后构建蛋白质-蛋白质相互作用网络图.基于DAVID数据库、微生信平台对筛选后的核心靶点进行基因本体论(GO)与京都基因与基因组百科全书(KEGG)富集分析,并绘制作图.最后应用分子对接技术验证核心成分与靶点蛋白的结合能力.结果:通过查找、筛选获取药物成分共 56 个,其中延胡索 49 个,鹿衔草 7 个;药物靶点 203个;疾病靶点 6 020 个;交集靶点 182 个.按照度值获得药物有效成分为槲皮素、山柰酚、β-谷甾醇等,有效蛋白靶点为丝氨酸/苏氨酸蛋白激酶 1(Akt Serine/Threonine Kinase 1,AKT1)、肿瘤抑制蛋白p53(Tumor Protein p53,TP53)、Jun原癌基因(Jun Proto-Oncogene,JUN)、肿瘤坏死因子(Tumor Necrosis Factor,TNF)、白细胞介素(Interleukin,IL)-6、表皮生长因子受体(Epidermal Growth Factor Receptor,EGFR)等.在GO分析中,生物过程主要参与RNA聚合酶Ⅱ启动子转录的正调控,转录的正调控(DNA模板),药物反应等 240 条过程;细胞组分主要参与核、质膜、细胞质等 27 条;分子功能主要参与结合蛋白、酶结合、相同蛋白结合等 48 条.KEGG富集分析中,靶点主要涉及癌症通路、磷脂酰肌醇 3 激酶(Phosphatidylinositol 3-kinase,PI3K)-蛋白激酶B(Akt)信号通路、癌症中的蛋白多糖、肿瘤坏死因子信号通路、丝裂原活化蛋白激酶(Mitogen-Activated Protein Kinase,MAPK)信号通路、人类嗜T淋巴细胞病毒(Human T-lymphotropic Virus,HTLV)感染、缺氧诱导因子(Hypoxia Inducible Factor,HIF)-1信号通路等94条通路.核心靶点蛋白与活性成分的对接验证也均显示有良好的结合性.结论:延胡索-鹿衔草药对是通过多靶点、多通路来干预癌症疼痛的,其主要机制可能与抗炎、调节神经的过程有关,这为临床中中药对癌症疼痛的干预治疗提供了一定的理论依据.
Discussion on the mechanism of treating cancer pain with Yanhusuo-Luxiancao based on network pharmacology and molecular docking technology
Objective:To explore the mechanism of Yanhusuo(Rhizoma Corydalis)-Luxiancao(Herba Pyrolae)in the treatment of cancer pain based on network pharmacology and molecular docking technology.Methods:The components and target of rhizoma corydalis and vherba pyrolae were searched in TCMSP,and the final target of the drug was obtained by matching,correction and screening against UniPort protein database,and the results were imported into Cytoscape 3.9.0 to construct the drug-component-target map.Cancer pain targets were screened from GeneCards database and OMIM database,respectively.In Venny 2.1.0,drug targets and disease targets are introduced.Venn diagrams were drawn to obtain intersection targets.Then,topology analysis was conducted on the intersection targets through String website and Cytoscape 3.9.0,and protein-protein interaction network map was constructed after screening.GO and KEGG enrichment analysis was performed for the screened core targets based on DAVID database and wechat bioinformatics platform,and graphs were drawn.Finally,molecular docking verification was carried out between the core target and the component.Results:A total of 56 drug components were obtained by searching and screening,including 49 of Yanhusuo and 7 of Luxiancao.With 203 drug targets,and 6 020 disease targets.There are 182 intersection targets.The effective components were quercetin,kaempferol,β-sitosterol,and the effective protein targets were RAC-alpha AKT1,TP53,JUN,TNF,IL-6,EGFR,etc..In GO analysis,BP was mainly involved in 240 processes including positive regulation of transcription from RNA polymerase Ⅱ promoter,positive regulation of transcription(DNA-templated)and response to drug.CC is mainly involved in 27 processes including nucleus,plasma membrane and cytoplasm.MF mainly participates in 48 processes including protein binding,enzyme binding and identical protein binding.In KEGG enrichment analysis,with 94 targets were mainly involved pathways in cancer,hepatitis B,PI3K-Akt signaling pathway,proteoglycans in cancer,chagas disease(American trypanosomiasis),TNF signaling pathway,MAPK signaling pathway,HTLV-I infection,HIF-1 signaling pathway,etc..The docking verification of core target protein and molecule also showed good binding ability.Conclusion:The combination of Yanhusuo and Luxiancao can intervene cancer pain through multi-target and multi-pathway,and the main mechanism may be related to anti-inflammatory and nerve regulation,which provides a certain theoretical basis for the intervention and treatment of cancer pain with TCM medicine.

YanhusuoLuxiancaoCancerous painNetwork pharmacologyMolecular docking

胡悦、姜庆辉、马宝柱、迟文成、姜家康

展开 >

黑龙江中医药大学,黑龙江 哈尔滨,150040

黑龙江中医药大学附属第一医院,黑龙江 哈尔滨,150040

延胡索 鹿衔草 癌症疼痛 网络药理学 分子对接

黑龙江省自然科学基金面上项目黑龙江省应用技术研究与开发计划项

H201478201903ZDKL010A

2024

中医临床研究
中华中医药学会

中医临床研究

影响因子:0.839
ISSN:1674-7860
年,卷(期):2024.16(1)
  • 57