首页|基于网络药理学和分子对接探讨柴葛芩连汤治疗儿童肺炎支原体肺炎作用机制

基于网络药理学和分子对接探讨柴葛芩连汤治疗儿童肺炎支原体肺炎作用机制

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目的:通过网络药理学方法和分子对接技术分析柴葛芩连汤治疗儿童肺炎支原体肺炎(Mycoplasma Pneumoniae Pneumonia,MPP)的作用机制.方法:检索中药系统药理学数据库与分析平台(TCMSP)数据库收集柴葛芩连汤的有效成分及对应靶点,采用Perl语言命令在UniProt数据库中批量检索预测靶标的上游基因名称;借助GeneCards与OMIM疾病数据库获取MPP相关疾病靶点;运用R软件得到两者交集靶标,并绘制韦恩图;通过Cytoscape 3.8.0软件对柴葛芩连汤治疗MPP的"中药-活性成分-潜在作用靶点"网络进行可视化,筛出核心节点;通过STRING 11.5数据库结合Cytoscape3.8.0软件构建交集靶点之间的蛋白相互作用网络,使用Cytoscape3.8.0软件的插件CytoHubba挖掘互作网络中的核心靶点;利用R语言对交集靶点进行基因本体论(GO)分析及京都基因与基因组百科全书(KEGG)相关通路的富集分析;最后通过AutoDock Vina对前期所得的关键活性成分与核心靶点进行分子对接验证.结果:筛选得到柴葛芩连汤治疗MPP的153个有效成分和47个药物-疾病共同靶标,并推断其作用机制可能与介导白细胞介素(Interleukin,IL)-17、核因子-κB(Nuclear Factor-KB,NF-κB)、肿瘤坏死因子(Tumor Necrosis Factor,TNF)等106条信号通路相关.槲皮素、山柰酚、汉黄芩素、黄芩苷、千层纸甲素A等有效成分与IL-6、白细胞介素(C-X-C Motif Chemokine Ligand,CXCL)8、TNF等靶标对接结果良好.结论:柴葛芩连汤的有效成分可能通过抑制炎性反应、调节免疫紊乱、改善肠道菌群失调等药理作用来治疗MPP.
Mechanism of Chaige Qinlian decoction in treating mycoplasma pneumoniae pneumonia in children based on network pharmacology and molecular docking
Objective:To analyze the mechanism of action of Chaige Qinlian decoction(柴葛芩连汤)in the treatment of mycoplasma pneumoniae pneumonia(MPP)in children by using network pharmacology and molecular docking technique.Methods:The active ingredients and targets of Chaige Qinlian decoction were screened by retrieving TCMSP database.Perl language command was used to batch search the upstream gene names of predicted targets in UniProt database.Disease targets related to mycoplasma pneumoniae in children were obtained by GeneCards and OMIM disease databases.The intersection targets of the two were obtained by using R software,and Wayne diagram was drawn.Cytoscape3.8.0 software was used to visualize the network of"Traditional Chinese Medicine-active ingredient-potential target"of Chaige Qinlian decoction in the treatment of mycoplasma pneumoniae pneumonia in children,and screen out the core nodes.The protein interaction network among intersection targets was constructed by STRING11.5 database combined with Cytoscape3.8.0 software,and the core targets in the interaction network were mined by CytoHubba,a plug-in of Cytoscape3.8.0 software.GO analysis and enrichment analysis of KEGG related pathways were performed for intersection targets using R language.Finally,AutoDock Vina was used to verify the molecular docking between the key active ingredients and the core target.Results:153 active ingredients and 47 drug-disease common targets of Chaige Qinlian decoction in the treatment of MPP were screened,and its mechanism of action was concluded to be related to 106 signaling pathways mediated by IL-17,NF-κB,TNF,etc.The effective ingredients such as quercetin,kaferol,baicalin,baicalin,papillaleucin A and other targets such as IL6,CXCL8 and TNF had good docking results.Conclusion:The active ingredients of Chaige Qinlian decoction may treat MPP through inhibiting inflammatory response,regulating immune disorder,improving intestinal flora disorder.

Chaige Qinlian decoctionMycoplasma pneumoniae pneumoniaMechanism of actionNetwork pharmacologyMolecular dockingChildren

乔晋丽、孙丹、李新民

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天津中医药大学第一附属医院,天津,300193

国家中医针灸临床研究中心,天津,300193

柴葛芩连汤 肺炎支原体肺炎 作用机制 网络药理学 分子对接 儿童

天津市科技计划项目天津中医药大学第一附属医院"拓新工程"基金科研课题

21JCZDJC01130201929

2024

中医临床研究
中华中医药学会

中医临床研究

影响因子:0.839
ISSN:1674-7860
年,卷(期):2024.16(15)